PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN49025.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 406aa    MW: 44797.3 Da    PI: 4.8889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN49025.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH130.000193593793555
                 TS-STCHHHHHHHHHHHHHHH CS
         HLH  35 skKlsKaeiLekAveYIksLq 55 
                  k  s a++L +Ave+Ik+Lq
  KHN49025.1 359 YKPTSTADMLDLAVEHIKDLQ 379
                 5679****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.93E-4343383No hitNo description
SuperFamilySSF474591.7E-5359395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-4361395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MSVMYSPVLN YSDVEYQLWK NQDMDSSIGH PQQHCHQSNS GLLRYCSAPS SMLASLIDNT  60
IHGCVNEEPF TSENQQQQQH YLPSTSSEME TMLSKMPPSN IGWSNSEPLQ EFGGKPVKQE  120
IGQFVPQGPP KQNGYSYGGS QLIYQSQQIQ GLPNGSSIAS ISAFDGSFGA VNSMASEDSI  180
QSKMGVRNCS NLFRQKSSPA GFFSIENDLA ALREVGSFKD NDVSNGQATA STSGLHSSLT  240
FSSRSSSCLK QMPPQIAENG NESLEENYDQ SRNLVNDNGS SKCYIPSFTN EFWESSAFNA  300
PKTENEDEIM FSTSNGLESQ ETDFSYQNHG LTHHLSLPSS STKMSSIEMF LQTQGSVPYK  360
PTSTADMLDL AVEHIKDLQQ QVQILSDRKA KCKCTRNEKH YTRTCA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU2159410.0GU215941.1 Glycine max clone BAC GmWBb_74M16, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003546874.10.0PREDICTED: transcription factor bHLH130 isoform X4
RefseqXP_006598252.20.0PREDICTED: transcription factor bHLH130 isoform X2
TrEMBLA0A0B2SVZ10.0A0A0B2SVZ1_GLYSO; Transcription factor bHLH130
STRINGGLYMA15G42680.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-10bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]